July 2016 — July 2016
3-D Simulations and NASA Supercomputer Advance Research of the Origin of Stars (Jul 21, 2016)
What processes are involved in the formation of individual stars
and stellar clusters in our own galaxy and other galaxies?
Scientists at the University of California, Berkeley, and Lawrence
Livermore National Laboratory are using NASA's most powerful
supercomputer, Pleiades, to create unique star-formation
simulations to answer this fundamental scientific question. Like
something from a video game, the simulations zoom through the
entire evolution of young star clusters. A giant cloud of inter...
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Genomic Sequencing at Children’s Mercy: Saving Time to Save Lives (Jul 21, 2016)
Genomic sequencing – that is, rapid sequencing – is instrumental to
diagnosing and treating critically ill patients, and managing the
high data volumes involved in genomics is essential to the process.
Children’s Mercy Hospital in Kansas City, MO, operates what it says
is the world’s first whole genome sequencing center in a pediatric
setting, where physicians, clinical laboratory scientists,
molecular geneticists, bioinformaticians and software engineers
work to sequence and analyze rar...
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Black Hole Jet Discovery (Jul 20, 2016)
Using supercomputing resources provided by the National Science
Foundation’s eXtreme Science and Engineering Discovery Environment
(XSEDE) and the Savio computer at UC Berkeley, Alexander “Sasha”
Tchekhovskoy and co-researcher Omer Bromberg — formerly a Lyman
Spitzer Jr. postdoctoral fellow at Princeton University, and
currently at the Hebrew University of Jerusalem in Israel —
resolved the 40-year puzzle of the astrophysical jet dichotomy.
Altogether the simulation effort took about 5...
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Huge Home-built Computer Used for Tetris (Jul 20, 2016)
A man has finished building an enormous computer in the sitting
room of his bungalow in Cambridge. James Newman started work on the
"Mega processor", which is 33ft wide and 6ft high, in 2012. It does
the job of a chip-sized microprocessor and Mr. Newman has spent
$53,000 creating it. It contains 40,000 transistors, 10,000 LED
lights and it weighs around half a tonne (500kg). So far, he has
used it to play the classic video game Tetris. In a video
demonstration he admits the game isn't easy to pl...
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NCAR Awards 42 Million Core Hours on Yellowstone Supercomputer (Jul 19, 2016)
Nine science projects were recently chosen to receive computational
time and storage space on the Yellowstone supercomputer in
Cheyenne. The most recent recommended allocations total 42.6
million core hours, 270 terabytes of archival storage, and 47,000
hours on data analysis and visualization systems, Shader says. To
provide some perspective on what these numbers mean, here are some
useful comparisons. In simplest terms, Yellowstone can be thought
of as 72,576 personal computers that are clever...
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SDSC, UC San Diego Health Sciences to Launch Year 2 of Mentoring Program (Jul 19, 2016)
The San Diego Supercomputer Center (SDSC) at the University of
California San Diego, in collaboration with the UC San Diego
Division of Health Sciences, is preparing to launch the second year
of a new mentoring program designed to provide a pathway for high
school students to gain access to experts in their field of
interest. The first phase of the Mentor Assistance Program (MAP),
co-founded by Ange Mason, SDSC’s education program manager, and
Kellie Church, assistant professor in the Departme...
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XSEDE16 Program Emphasizes Inclusion, Says Chair Kelly Gaither (Jul 18, 2016)
HPCWire reached out to XSEDE16 conference chair Dr. Kelly Gaither
to get the inside track on this year’s program, her work in
scientific visualization and her commitment to increasing diversity
in HPC. Gaither serves as the director of Visualization at the
Texas Advanced Computing Center at The University of Texas at
Austin. Over the past ten years, she has actively participated in
conferences related to her field and has given numerous invited
talks. During the interview she said, “Attendee...
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University of Melbourne Releases Spartan HPC Service (Jul 18, 2016)
The University of Melbourne has launched a new high performance
computing (HPC) service called Spartan. It combines traditional HPC
with a cloud computing component and the university claims that no
other university has put a system like this into production.
University of Melbourne head of research computer services, Bernard
Meade, said the application of HPC and cloud techniques would
increase research productivity across a wide range of disciplines.
Spartan can grow and evolve according to th...
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Supercomputing for Better Fireworks (Jul 17, 2016)
To improve the bombastic experience, scientists took to
supercomputers to concoct the perfect pyrotechnical recipe.
Fireworks accompany all types of celebrations, from weddings to
sporting events, to political rallies, and holidays. They achieve
their expected effect when a launched packet of combustible
particles detonates overhead. As the ensuing explosion forces these
grains outward — unlike in the vacuum of space where they would
travel forever outward — the drag in our atmosphere slows ...
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Lawrence Livermore National Laboratory Dedicates New Supercomputer Facility (Jul 17, 2016)
Officials from the Department of Energy's National Nuclear Security
Administration (NNSA) and government representatives today
dedicated a new supercomputing facility at Lawrence Livermore
National Laboratory (LLNL). The $9.8 million modular and
sustainable facility provides the Laboratory flexibility to
accommodate future advances in computer technology and meet a
rapidly growing demand for unclassified high-performance computing
(HPC). The facility houses supercomputing systems in support of
N...
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Now Hiring: Women With These Degrees (Jul 15, 2016)
Picture a software engineer or video game developer. What do you
see? Chances are it's not a woman. One reason is that women are
still very much in the minority in computer sciences and
engineering. Even though there are many efforts underway to
encourage girls from a young age to pursue STEM fields, the
pipeline of women coming out of college with degrees in engineering
and computer science is still very small relative to men. That's
also why talented women entering the workforce with degrees i...
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Analog Computing Returns (Jul 15, 2016)
A transistor, conceived of in digital terms, has two states: on and
off, which can represent the 1s and 0s of binary arithmetic. But in
analog terms, the transistor has an infinite number of states,
which could, in principle, represent an infinite range of
mathematical values. Digital computing, for all its advantages,
leaves most of transistors’ informational capacity on the table. In
recent years, analog computers have proven to be much more
efficient at simulating biological systems than di...
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We Need To Talk About AI And Access To Publicly Funded Data-sets (Jul 14, 2016)
For more than a decade the company formerly known as Google,
latterly rebranded Alphabet to illustrate the full breadth of its A
to Z business ambitions, has engineered an annually increasing
revenue generating empire which last year pulled in ~$75 billion.
And it’s done this mostly by mining user data for ad targeting
intel. It’s an abstract idea for starters, and a personal cost
that’s far harder to quantify given how unclear it is what Google
really does with the data it gathers and pro...
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Require Computer Science But Don't Replace Other Classes (Jul 14, 2016)
Computer science, if installed in all of Iowa's schools, should not
replace other classes and instead be a main course, according to a
committee with the Governor's STEM Advisory Council. "We believe it
is time that computer science is recognized as a core discipline,"
Mark Gruwell, co-chairman of the computer science committee, told
members of the Council. Gruwell told the Register the group does
not want computer science class time to supplant math, foreign
language or other coursework. If the...
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Obama, NIH Announce Big Data Gathering Push For Precision Medicine (Jul 13, 2016)
One could be forgiven for experiencing a bit of hopeful, skepticism
in response to U.S. President Barack Obama Administration’s
statement in May regarding re-energizing the “War Against Cancer.”
The war against cancer is a many-decades old effort with mixed
results – great progress in many areas but matched with
disappointment in others. Winning the war still seems rather
far-off. Precision Medicine is a powerful idea – mostly marshaling
insights from varying genomics technologies and ...
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Extortion Extinction: Researchers Develop A Way To Stop Ransomware (Jul 13, 2016)
Ransomware - what hackers use to encrypt your computer files and demand money in exchange for freeing those contents - is an exploding global problem with few solutions, but a team of University of Florida researchers says it has developed a way to stop it dead in its tracks. The answer, they say, lies not in keeping it out of a computer but rather in confronting it once it's there and, counterintuitively, actually letting it lock up a few files before clamping down on it.
Computer Science Is Future-Proof (Jul 12, 2016)
Here are some of the more outlandish predictions for the jobs
people might hold in the future: mind-uploading specialist,
personalized microbiome steward or de-extinction zoologist. I, for
one, am looking forward to my second career in 2030 as a
professional "triber" and crowdfunding specialist. No one can
really say for certain what the jobs of the future will be. A
former educator with whom I recently met argued that uncertainty
about the future job market means that giving students
opportunit...
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New, Better Way To Build Circuits For World's First Useful Quantum Computers (Jul 12, 2016)
The era of quantum computers is one step closer as a result of
research published in the current issue of the journal Science. The
research team has devised and demonstrated a new way to pack a lot
more quantum computing power into a much smaller space and with
much greater control than ever before. The research advance, using
a 3-dimensional array of atoms in quantum states called quantum
bits -- or qubits -- was made by David S. Weiss, professor of
physics at Penn State University, and three s...
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A Celebration Of Women In HPC (Jul 11, 2016)
Why are there not more women in HPC? This was the simple question
that led to the formation of the Women in HPC (WHPC) network nearly
three years ago. Under the direction of founder Dr. Toni Collis of
the Edinburgh Parallel Computing Centre (EPCC), the organization
has been gaining momentum and making a name for itself since its
inaugural Women in HPC workshop at SC14. At ISC 2016 in Frankfurt,
Germany, WHPC expanded its program to three events: its fourth
international Women in High Performance...
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Can Technology Protect Soft Targets Against Mass Shootings And Terrorist Attacks? (Jul 11, 2016)
Sandy Hook, Charlie Hebdo, San Bernardino, the Paris Attacks,
Brussels, Istanbul. Virtually all of these terrorist attacks and
mass shootings occurred in what are known as "soft target"
locations: big spaces with multiple entries and exits, lots of
people, and relatively little protection. Soft targets like
airports often contain more stringent security inside, but those
security checkpoints, scanners and pat-downs you endure at the TSA
are intended to protect the airplanes and their passengers....
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The End Of Your Undivided Attention (Jul 10, 2016)
Many things have sought to capture your undivided attention, but
that might be the ghost of a goal in today’s reality. We’re less
attentive than goldfish; even our best and brightest can’t focus;
and we’re more likely than ever to be paying less than full
attention in even circumstances where distraction can be deadly.
And that genie isn’t going back in the bottle, so responsible
product design now has to assume a high and growing average level
of user distraction. Already, the product...
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Researchers Break Record For DNA Data Storage (Jul 10, 2016)
University of Washington and Microsoft researchers have broken what
they believe is the world record for the amount of digital data
successfully stored—and retrieved—in DNA molecules. The team of
computer scientists and electrical engineers encoded and decoded a
video of the band OK Go (featuring the craziest Rube Goldberg
machine ever), the Universal Declaration of Human Rights in more
than 100 languages, the top 100 books of Project Gutenberg and the
Crop Trust's seed database—among othe...
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OLCF Researchers Scale R to Tackle Big Science Data Sets (Jul 9, 2016)
Sometimes lost in the discussion around big data is the fact that
big science has long generated huge data sets. “In fact,
large-scale simulations that run on leadership-class supercomputers
work at such high speeds and resolution that they generate
unprecedented amounts of data. The size of these datasets—ranging
from a few gigabytes to hundreds of terabytes—makes managing and
analyzing the resulting information a challenge in its own right,”
notes an article posted on Oak Ridge Nationa...
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Tiny Bacteria-powered 'Windfarm' For Your Phone? (Jul 9, 2016)
A team of scientists from Oxford University has shown how the natural movement of bacteria could be harnessed to assemble and power microscopic 'windfarms' -- or other human-made micromachines such as smartphone components. The study, published in the journal Science Advances, uses computer simulations to demonstrate that the chaotic swarming effect of dense active matter such as bacteria can be organised to turn cylindrical rotors and provide a steady power source.
IBM Supercomputer Watson to Help Advance Preschool Education (Jul 8, 2016)
Sesame Workshop and IBM announced a collaboration to use IBM
Watson’s cognitive computing technology and Sesame’s early
childhood expertise to help advance preschool education around the
world. As part of a three-year agreement, Sesame Workshop and IBM
will collaborate to develop educational platforms and products that
will be designed to adapt to the learning preferences and aptitude
levels of individual preschoolers. Research shows that a
significant extent of brain development occurs in t...
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